STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc2676Probable transmembrane protein. (178 aa)    
Predicted Functional Partners:
RSc2677
Putative type 4 fimbrial biogenesis pilw-related protein transmembrane.
  
  
 0.865
RSc2678
Probable type 4 fimbrial biogenesis pilv-related transmembrane protein.
  
  
 0.851
RSc2675
Putative type 4 fimbrial biogenesis pily1-related protein signal peptide.
  
  
 0.810
pilE2
Probable type 4 fimbrial biogenesis transmembrane protein.
  
  
 0.808
RSc2679
Putative type 4 fimbrial pilin related transmembrane protein.
  
  
 0.795
RSc2674
Putative glutathione peroxidase protein; Belongs to the glutathione peroxidase family.
       0.472
RSc0727
Putative type-4 fimbrial biogenesis pilv-related transmembrane protein.
  
  
 0.442
pilV
Putative type-4 fimbrial biogenesis pilv transmembrane protein.
  
  
 0.442
RSc0718
Putative type 4 fimbrial biogenesis pily1-related protein transmembrane.
  
  
 0.440
RSc0724
Putative type-4 fimbrial biogenesis pily1-related signal peptide protein.
  
  
 0.440
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.