STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc2677Putative type 4 fimbrial biogenesis pilw-related protein transmembrane. (336 aa)    
Predicted Functional Partners:
RSc2678
Probable type 4 fimbrial biogenesis pilv-related transmembrane protein.
 
  
 0.979
RSc2675
Putative type 4 fimbrial biogenesis pily1-related protein signal peptide.
 
  
 0.959
RSc2679
Putative type 4 fimbrial pilin related transmembrane protein.
 
  
 0.949
pilE2
Probable type 4 fimbrial biogenesis transmembrane protein.
 
  
 0.948
RSc0727
Putative type-4 fimbrial biogenesis pilv-related transmembrane protein.
 
  
 0.869
RSc2676
Probable transmembrane protein.
  
  
 0.865
RSc0724
Putative type-4 fimbrial biogenesis pily1-related signal peptide protein.
 
  
 0.847
pilP
Probable fimbrial type-4 assembly lipoprotein.
  
  
 0.802
RSc0718
Putative type 4 fimbrial biogenesis pily1-related protein transmembrane.
 
  
 0.768
RSc0725
Probable type 4 fimbrial biogenesis pilx-related protein transmembrane.
 
  
 0.753
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.