STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dpsPutative dna protection during starvation or oxydative stress transcription regulator protein; Belongs to the Dps family. (166 aa)    
Predicted Functional Partners:
clpS
Hypothetical atp-dependent clp protease adaptor protein clps; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation.; Belongs to the ClpS family.
   
 
 0.874
RSc0753
Probable transmembrane protein.
  
  
 0.751
ubiA
Probable 4-hydroxybenzoate octaprenyltransferase transmembrane protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
       0.695
RSc0407
Putative sigma-54 modulation protein.
  
    0.686
RSp0326
Probable organic hydroperoxide resistance protein.
  
  
 0.658
ohr
Probable organic hydroperoxide resistance protein.
  
  
 0.658
ahpF
Probable alkyl hydroperoxide reductase (subunit f) oxidoreductase protein; EC_number 1.6.4.-.
 
  
 0.654
ahpC1
Probable alkyl hydroperoxide reductase (subunit c) oxidoreductase protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
 
  
 0.594
RSc1745
Putative transcription regulator protein; Belongs to the BolA/IbaG family.
   
  
 0.557
RSc0633
Putative flavodoxin/nitric oxide synthase; protein.
  
  
 0.550
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.