STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2718Probable signal peptide protein; Belongs to the UPF0312 family. (189 aa)    
Predicted Functional Partners:
RSc2719
Putative cytochrome b-561 transmembrane protein.
  
 0.988
RSc2717
Probable signal peptide protein; Belongs to the UPF0312 family.
 
     0.913
RSc0790
Probable signal peptide protein; Belongs to the UPF0312 family.
 
     0.793
RSc3260
Probable cytochrome c551/c552 transmembrane protein.
  
     0.454
RSc0199
Probable cytochrome b561 cytochrome transmembrane protein.
 
  
 0.453
purB
Probable adenylosuccinate lyase protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
       0.435
RSc0629
Putative oxidoreductase cytochrome c552 precursor signal peptide protein.
  
     0.401
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.