STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc2738Probable response regulator transcription regulator protein. (336 aa)    
Predicted Functional Partners:
phcS
Transmembrane sensor histidine kinase transcription regulator protein.
 
 
 0.912
phcB
Regulatory protein.
 
 
 
 0.880
phcR
Two component response regulator transcription regulator protein.
 
 
 
0.753
RSc2734
Probable response regulator transcription regulator protein.
  
   
 0.580
RSc0672
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator); Putative composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein.
 
 
 0.557
RSp0254
Probable signal transduction eal-ggdef domains transmembrane protein.
  
 
 0.545
fliM
Probable flagellar motor switch protein flim.
  
  
 0.533
fleN
Putative flagellar synthesis regulator flen protein.
  
 
 0.526
cheA
Probable chemotaxis sensor histidine kinase transcription regulator protein.
 
 
 0.512
pehS
Probable transmembrane sensor histidine kinase transcription regulator protein.
 
 
 0.510
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.