STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
phcAHTH-type transcriptional regulator PhcA; Regulates the transcription of one or more of the genes involved in virulence. (347 aa)    
Predicted Functional Partners:
phcB
Regulatory protein.
  
 
 0.866
phcS
Transmembrane sensor histidine kinase transcription regulator protein.
  
   
 0.812
xpsR
Transcription regulator xpsr transcription regulator protein.
      
 0.779
phcR
Two component response regulator transcription regulator protein.
  
   
 0.777
hrpB
Regulatory hrpb. transcription regulator protein; Positive regulation of hypersensitive response genes involved in plant pathogenicity and partly of its own synthesis in minimal medium.
   
  
 0.752
RSc2655
Probable transmembrane protein.
  
    0.680
pehS
Probable transmembrane sensor histidine kinase transcription regulator protein.
  
   
 0.680
hrpG
Response regulator transcription regulator protein.
      
 0.678
vsrB
Composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein.
  
  
 0.658
prhJ
Transcription regulator prhj transcription regulator protein.
   
  
 0.633
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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