STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2755Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (303 aa)    
Predicted Functional Partners:
dgoAb
Putative galactonate dehydratase protein; Catalyzes the dehydration of D-galactonate to 2-keto-3-deoxy- D-galactonate.
 
   
 0.925
dgoAa
Putative 2-dehydro-3-deoxyphosphogalactonate aldolase protein.
 
   
 0.893
RSc2754
Probable ipr011013 galactose mutarotase-like protein.
 
   
 0.880
dgoK
Probable 2-dehydro-3-deoxygalactonokinase protein.
 
   
 0.818
RSc2753
Probable ipr002198 short-chain dehydrogenase/reductase oxidoreductase protein.
  
  
 0.777
araH
Probable l-arabinose transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family.
       0.759
araG
Probable l-arabinose atp-binding abc transporter protein; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.
     
 0.758
araF
Probable l-arabinose-binding periplasmic (pbp) abc transporter protein; Belongs to the bacterial solute-binding protein 2 family.
 
     0.727
RSc1610
Probable transcription regulator protein.
      0.573
tktA
Probable transketolase protein; Belongs to the transketolase family.
     
 0.558
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.