STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2766Probable guanyl-specific ribonuclease precursor signal peptide protein. (143 aa)    
Predicted Functional Partners:
RSc2765
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
 
 0.988
RSc0535
Hypothetical signal peptide protein.
  
     0.668
RSp1155
Probable signal transduction protein eal-ggdef domains.
      
 0.631
trmB
Putative trna (guanine-n(7)-)-methyltransferase (trna(m7g46)-methyltransferase) protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
     0.557
RSp0334
Probable signal transduction protein eal-ggdef domains.
      
 0.550
RSp0254
Probable signal transduction eal-ggdef domains transmembrane protein.
      
 0.549
RSc0536
Probable short-chain dehydrogenase transmembrane protein.
  
     0.486
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.