STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2783Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (224 aa)    
Predicted Functional Partners:
gspH
Probable general secretory pathway h transmembrane protein.
  
     0.696
gspM
Probable general secretory pathway m transmembrane protein.
  
     0.687
gspK
Probable general secretory pathway k transmembrane protein.
  
     0.683
RSc2784
Putative ipr012335 thioredoxin fold transmembrane protein.
   
   0.664
gspJ
Probable general secretory pathway j transmembrane protein.
  
     0.655
RSc0053
Hypothetical protein of unknown function duf484.
  
     0.651
gspI
Probable general secretory pathwayItransmembrane protein.
  
     0.615
mpl
UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily.
  
    0.614
RSc2781
Putative ipr000379 esterase/lipase/thioesterase protein.
       0.605
RSc2356
Probable bifunctional: uroporphyrin-III c-methyltransferase and uroporphyrinogen-III synthase transmembrane protein.
  
     0.591
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.