STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilCProbable fimbrial assembly transmembrane protein. (421 aa)    
Predicted Functional Partners:
pilD
Type 4 prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.991
pilB
Probable type iv pilus assembly protein.
 
 0.982
pilM
Probable fimbrial type-4 assembly protein.
 
 
 
 0.909
RSp0464
Probable gspe-related protein.
 
 0.897
RSc2308
Probable type II secretory pathway gspe-related protein.
 
 0.896
gspE
Probable general secretion pathway protein e; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 0.896
RSp0148
Putative general secretion pathway gspe-related protein.
 
 0.896
pilT
Probable twitching mobility protein transport fimbria.
  
 0.892
pilQ
Probable fimbrial type-4 assembly signal peptide protein.
 
 
 
 0.886
pilO
Probable fimbrial type-4 assembly membrane transmembrane protein.
 
 
 
 0.856
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.