STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2858Putative zinc protease protein; EC_number 3.4.99.-. (384 aa)    
Predicted Functional Partners:
RSc2859
Probable ipr006963 molybdopterin oxidoreductase fe4s4 region oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.786
fruR
Putative transcription regulation repressor transcription regulator protein.
       0.576
fadD1
Probable long-chain-fatty-acid--coa ligase protein.
       0.559
RSc0493
Probable protein of unknown function duf583.
  
     0.514
RSc0306
Putative esterase of the alpha-beta hydrolase superfamily protein.
  
     0.473
RSc0492
Putative dna binding; transmembrane protein.
  
     0.443
RSc2082
Putative lipase transmembrane protein.
  
     0.439
RSc2778
Putative tonb-related transmembrane protein.
  
     0.404
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.