STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2859Probable ipr006963 molybdopterin oxidoreductase fe4s4 region oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (698 aa)    
Predicted Functional Partners:
RSc2376
Putative ferredoxin protein.
  
 
 0.965
RSc2372
Probable formate dehydrogenase (iron-sulfur subunit) oxidoreductase protein.
 
 
 0.948
RSc2858
Putative zinc protease protein; EC_number 3.4.99.-.
       0.786
RSp1220
Probable flavoprotein fad oxidoreductase.
  
 0.747
coxM
Probable cytochrome c oxidase polypeptide II (cytochrome bb3 subunit 2) transmembrane protein.
  
 
 0.723
moeA1
Probable molybdopterin biosynthesis moea protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
  
 0.685
gltB
Probable glutamate synthase (large subunit) oxidoreductase protein.
  
 
 0.678
RSc3256
Putative cytochrome c-related protein.
 
 
 0.671
petA
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.619
tuf1
Probable elongation factor tu (ef-tu protein); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.609
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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