STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
RSc2859Probable ipr006963 molybdopterin oxidoreductase fe4s4 region oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (698 aa)    
Predicted Functional Partners:
RSc2376
Putative ferredoxin protein.
  
 
 0.964
RSc2372
Probable formate dehydrogenase (iron-sulfur subunit) oxidoreductase protein.
  
 
 0.943
RSc2858
Putative zinc protease protein; EC_number 3.4.99.-.
       0.823
RSp1220
Probable flavoprotein fad oxidoreductase.
  
 0.758
coxM
Probable cytochrome c oxidase polypeptide II (cytochrome bb3 subunit 2) transmembrane protein.
   
 
 0.712
moeA1
Probable molybdopterin biosynthesis moea protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
  
 0.693
RSc3256
Putative cytochrome c-related protein.
 
 
 
 0.674
tuf1
Probable elongation factor tu (ef-tu protein); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.621
tuf2
Probable elongation factor tu (ef-tu protein).
   
 
 0.621
moeA2
Putative molybdopterin biosynthesis moea protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
  
 0.604
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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