STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
paaIProbable phenylacetic acid degradation protein. (155 aa)    
Predicted Functional Partners:
paaK
Probable phenylacetyl-coa-ligase protein; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.996
paaC
Probable phenylacetic acid degradation protein.
 
 
 0.996
paaB
Probable phenylacetic acid degradation protein.
 
 
 0.995
paaD
Probable phenylacetic acid degradation protein.
 
 
 0.995
paaA
Probable phenylacetic acid degradation protein.
 
 
 0.993
paaE
Probable ferredoxin reductase protein.
 
 
 0.991
paaG1
Probable enoyl-coa hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.909
paaF
Putative enoyl-coa hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.777
RSc0304
Probable enoyl-coa hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.688
RSp1422
Putative peptide synthetase protein.
  
 
 0.684
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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