STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RSc2891Putative ipr002085 alcohol dehydrogenase superfamily, zinc-containing oxidoreductase protein. (338 aa)    
Predicted Functional Partners:
RSc2536
Putative transmembrane aldehyde dehydrogenase oxidoreductase protein.
    
 0.910
mmsA
Probable methylmalonate-semialdehyde dehydrogenase oxidoreductase protein.
    
 0.910
RSp1055
Probable transmembrane aldehyde dehydrogenase oxidoreductase protein.
    
 0.910
RSc1799
Putative dihydrolipoamide acetyltransferase (component e2 of pyruvate dehydrogenase complex) protein.
   
 0.909
paaF
Putative enoyl-coa hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.908
prpC
Probable methylcitrate synthase (citrate synthase 2) protein; Belongs to the citrate synthase family.
   
 0.908
RSc0274
Probable acyl coa dehydrogenase oxidoreductase protein.
   
  0.907
prpE
Propionyl-coenzyme a synthetase prpe protein.
   
 
 0.905
acsA
Probable acetyl-coenzyme a synthetase (acetate--coa ligase) (acyl-activating enzyme) protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.905
RSp0651
Probable acetyl-coenzyme a synthetase (acetate--coa ligase) protein.
   
 
 0.905
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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