STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
opgHProbable glucans biosynthesis glucosyltransferase h. transmembrane protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). (862 aa)    
Predicted Functional Partners:
opgG
Putative glucans biosynthesis g precursor. signal peptide protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).
  
 0.995
opgD1
Putative glucans biosynthesis protein d 1 precursor; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs).; Belongs to the OpgD/OpgG family.
  
 0.854
opgD2
Probable periplasmic glucans biosynthesis transmembrane protein; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs); Belongs to the OpgD/OpgG family.
  
 0.845
iscS
Probable cysteine sulfinate desulfinase / cysteine desulfurase protein; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.
      
 0.485
clpA
Probable atp-dependent protease (atp-binding specificity subunit) protein; Belongs to the ClpA/ClpB family.
      
 0.465
RSc3401
Probable type III effector protein (skwp 1).
      
 0.460
RSc2910
Probable signal peptide protein.
       0.457
gltB
Probable glutamate synthase (large subunit) oxidoreductase protein.
     
 0.452
trxB
Probable thioredoxin reductase oxidoreductase protein.
      
 0.434
RSp1672
Putative cog3233, deacetylase protein.
  
     0.418
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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