STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2920Putative hydroxamate-type ferrisiderophore receptor signal peptide protein. (801 aa)    
Predicted Functional Partners:
RSc2919
Putative iron transport-sensory transduction transmembrane protein.
 
 
 0.964
RSp1422
Putative peptide synthetase protein.
 
  
 0.950
RSc2918
Putative extracytoplasmic function sigma factor (iron-regulated) transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.896
prhR
3-compartiment signal transduction system, component prhr transmembrane protein.
 
 
 0.827
RSp0422
Probable siderophore synthetase component protein.
  
  
 0.686
RSp0419
Probable siderophore synthetase component protein.
  
  
 0.685
RSp1642
Probable transmembrane protein.
 
  
 0.634
RSc0421
Putative multidrug-efflux transporter transmembrane protein.
   
  
 0.625
RSc1806
Probable polyketide synthase protein.
   
  
 0.610
RSc1271
Probable dihydrolipoamide dehydrogenase (component of pyruvate and 2-oxoglutarate dehydrogenases complexes) oxidoreductase protein.
      
 0.609
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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