STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2920Putative hydroxamate-type ferrisiderophore receptor signal peptide protein. (801 aa)    
Predicted Functional Partners:
RSc2919
Putative iron transport-sensory transduction transmembrane protein.
 
 
 0.955
RSp1422
Putative peptide synthetase protein.
 
  
 0.916
RSc2918
Putative extracytoplasmic function sigma factor (iron-regulated) transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.896
RSc2041
Urea transport system substrate-binding protein; Probable abc-type branched-chain amino acid transport systems, periplasmic component harboring a twin-arginine translocation pathway signal; abc transporter protein.
   
  
 0.882
RSc0545
Probable oxidoreductase protein.
   
  
 0.849
RSp0911
Putative salicylate hydroxylase oxidoreductase protein.
   
  
 0.849
prhR
3-compartiment signal transduction system, component prhr transmembrane protein.
 
 
 0.784
RSc0626
Probable aldehyde dehydrogenase (subunit III) oxidoreductase protein.
   
    0.716
iorA2
Probable isoquinoline 1-oxidoreductase (alpha subunit) oxidoreductase protein.
   
    0.716
RSp0324
Probable dehydrogenase, small chain oxidoreductase protein.
   
    0.716
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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