STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc2934Probable bacterial extracellular solute-binding, family 1; abc transporter protein. (403 aa)    
Predicted Functional Partners:
RSc2938
Putative transmembrane abc transporter protein.
 
 
 0.990
RSc2936
Putative transmembrane sensor kinase transcription regulator protein.
     0.982
RSc1735
Probable two-component transmembrane sensor kinase transcription regulator protein.
     0.968
RSc2939
Probable atp-binding abc transporter protein.
 
 
 0.950
RSc2937
Putative periplasmic iron-binding signal peptide protein.
 
  
 
0.939
RSc0549
Probable transmembrane sensor histidine kinase transcription regulator protein.
     0.888
RSc2935
Putative response regulator transcription regulator protein.
 
     0.626
RSc1351
Putative transmembrane sensor histidine kinase transcription regulator protein.
   
   0.597
RSc0115
Probable hemagglutinin-related autotransporter protein.
  
    0.406
RSp1553
Probable transmembrane two-component sensor kinase transcription regulator protein.
     0.400
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.