STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2954Probable transcription regulator protein; Belongs to the BolA/IbaG family. (78 aa)    
Predicted Functional Partners:
RSc2904
Putative ipr004480 glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 
 
 0.877
RSc1745
Putative transcription regulator protein; Belongs to the BolA/IbaG family.
 
   
 0.787
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
  
 0.734
RSc2955
Putative abc-type multidrug transport system, permease component abc transporter protein.
 
    0.705
RSc2956
Probable atp-binding abc transporter protein.
       0.634
rpsU
Probable 30s ribosomal protein s21; Belongs to the bacterial ribosomal protein bS21 family.
   
    0.461
gloA
Probable lactoylglutathione lyase (methylglyoxalase) protein.
  
     0.460
RSc2957
Hypothetical signal peptide protein.
     
 0.451
sspA
Probable stringent starvation a transcription regulator protein.
 
     0.435
RSc2958
Probable signal peptide protein.
       0.415
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.