STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2960Probable signal peptide protein. (173 aa)    
Predicted Functional Partners:
RSc2961
Putative abc-type transport system involved in resistance to organic solvents, permease component abc transporter protein.
 0.999
RSc2962
Probable atp-binding abc transporter protein.
 
 0.997
RSc2958
Probable signal peptide protein.
 
 0.995
RSc0313
Putative abc-type transport system involved in resistance to organic solvents, permease component abc transporter protein.
 
 0.987
RSc0314
Probable cog1127, abc-type transport system involved in resistance to organic solvents, atpase component abc transporter protein.
  
 0.966
RSc2959
Putative vacj-like lipoprotein; transmembrane.
 
   
 0.954
RSc2957
Hypothetical signal peptide protein.
  
 0.942
RSc0315
Probable abc-type transport system involved in resistance to organic solvents, periplasmic component abc transporter protein.
     
 0.910
RSp0916
Probable vacj-related lipoprotein.
 
   
 0.790
bamA
Putative outer membrane signal peptide protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
    0.489
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (28%) [HD]