STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2982Probable cog5662, transmembrane transcriptional regulator (anti-sigma factor) transmembrane protein. (286 aa)    
Predicted Functional Partners:
rpoE2
Probable rna polymerase sigma-e factor (sigma-24) transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.950
RSc2984
Probable transmembrane protein.
 
     0.922
msrP
Conserved hypothetical protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R [...]
       0.543
msrQ
Probable transmembrane protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, [...]
       0.542
RSp1276
Probable atp-dependent dna helicase II protein.
  
     0.530
RSc1198
Putative abc-type nitrate/sulfonate/bicarbonate transport system, periplasmic component abc transporter protein.
  
     0.522
RSp1651
Probable rna polymerase sigma factor transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.496
RSc2985
Probable cytochrome c assembly; abc transporter protein.
       0.479
RSc2986
Probable cytochrome c biogenesis transmembrane protein.
       0.479
RSc2360
Putative ferritin/ribonucleotide reductase-like; protein.
 
     0.453
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.