STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc3026Hypothetical sam (or some other nucleotide) binding motif protein. (196 aa)    
Predicted Functional Partners:
RSc3027
Probable signal peptide protein.
       0.741
RSc3030
Hypothetical precursor. signal peptide protein; Protects the bacterial cell from host peptidases.
       0.687
RSc3028
Putative signal peptide protein.
       0.685
RSc3029
Hypothetical signal peptide protein.
       0.685
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.587
recQ
Probable atp-dependent dna helicase protein.
 
   
 0.579
RSc3031
Hypothetical protein of unknown function duf1175.
       0.572
RSc3032
Probable transmembrane protein.
       0.572
RSp0625
Probable magnesium chelatase (subunits dI protein.
  
 
 0.561
RSc1806
Probable polyketide synthase protein.
  
 
 0.545
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.