STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc3048Probable sugar abc transporter, permease abc transporter protein. (296 aa)    
Predicted Functional Partners:
RSc3046
Putative sugar-phosphate atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
 
 0.997
RSc3047
Probable atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
 
 0.997
RSc3049
Probable transmembrane abc transporter protein.
 0.997
RSc3051
Putative bacterial extracellular solute-binding, family 1; abc transporter protein.
 
 0.992
RSc3050
Probable transmembrane protein.
 
    0.941
RSc2142
Probable transmembrane abc transporter protein.
 
 0.911
upgC
Probable sn-glycerol-3-phosphate transport atp-binding abc transporter protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
 
 0.876
RSc2140
Probable sugar atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
 
 
 0.860
ugpE
Probable sn-glycerol-3-phosphate transmembrane abc transporter protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 0.852
RSc2144
Probable sugar-binding periplasmic signal peptide protein.
 
 
 0.741
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.