STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
manAProbable mannose-6-phosphate isomerase protein. (410 aa)    
Predicted Functional Partners:
RSc3059
Probable sugar transporter transmembrane protein.
       0.773
RSc1400
Putative transmembrane protein.
  
     0.627
RSc2754
Probable ipr011013 galactose mutarotase-like protein.
 
  
 0.530
RSp1095
Probable activation/secretion signal peptide protein.
  
     0.461
RSc3436
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.445
RSc1083
Putative galactose mutarotase-like protein.
 
  
 0.434
RSc1255
Probable transmembrane protein.
  
     0.420
RSc1355
Hypothetical protein of unknown function upf0131.
  
     0.407
opgD1
Putative glucans biosynthesis protein d 1 precursor; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs).; Belongs to the OpgD/OpgG family.
       0.407
RSc3154
Probable signal peptide protein.
  
   
 0.404
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.