STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc3062Probable transcription regulator protein. (268 aa)    
Predicted Functional Partners:
flgG
Probable flagellar basal-body rod protein flgg (distal rod protein).
    
   0.683
RSp0185
Putative transcription regulator protein.
  
  
 0.646
RSp0641
Probable non ribosomal peptide synthetase protein.
     
 0.604
cobB-2
Putative nad-dependent protein deacetylase; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form; Belongs to the sirtuin family. Class III subfamily.
  
    0.603
RSc1806
Probable polyketide synthase protein.
     
 0.558
RSp1422
Putative peptide synthetase protein.
  
  
 0.540
RSc1804
Putative peptide synthase with thioesterase and phosphopantetheinyl transferase domains protein; Belongs to the P-Pant transferase superfamily.
     
 0.516
gltB
Probable glutamate synthase (large subunit) oxidoreductase protein.
     
 0.516
RSc1997
Probable transcription regulator protein.
  
  
 0.514
hutC
Probable histidine utilization repressor transcription regulator protein.
  
  
 0.514
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.