STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc3064Probable response regulator transcription regulator protein. (243 aa)    
Predicted Functional Partners:
RSc3063
Probable transmembrane sensor histidine kinase transcription regulator protein.
 
 0.964
RSp0524
Probable transmembrane sensor histidine kinase transcription regulator protein.
 
 
 0.828
RSc3079
Probable composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein.
 
 
 0.817
RSp1454
Probable two-component transmembrane sensor kinase transcription regulator protein.
 
 
 0.817
RSp1441
Probable two-component sensor kinase transcription regulator protein.
 
 
 0.812
RSp1043
Probable two-component sensor histidine kinase transcription regulator protein.
 
 
 0.808
rcsC
Probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein.
 
 
 0.792
RSp1195
Probable two component transmembrane sensor kinase transcription regulator protein.
 
 
 0.791
RSc3403
Probable two-component sensor kinase transcription regulator protein.
 
 
 0.784
RSp1676
Probable composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein.
 
 
0.780
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.