STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc3094Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (264 aa)    
Predicted Functional Partners:
repA
Probable repa replicase protein.
  
     0.734
RSp0116
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.718
RSc1397
Probable transmembrane protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.704
rseA
Putative transmembrane sigma-e factor negative regulatory transcription regulator protein.
  
     0.677
parB
Putative partitioning protein; Belongs to the ParB family.
  
     0.665
RSp0309
Putative transcription regulator protein.
  
   
 0.657
RSc0317
Probable transmembrane protein.
  
     0.652
RSc3360
Hypothetical transmembrane protein.
  
     0.650
RSp0660
Probable porin protein.
  
     0.639
RSc2383
Putative transmembrane protein.
  
     0.637
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.