STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc3098Putative gcn5-related n-acetyltransferase; protein. (231 aa)    
Predicted Functional Partners:
RSc0299
Putative prolin-rich signal peptide protein.
  
    0.759
RSc2765
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.749
RSc1598
Probable two-component transmembrane sensor histidine kinase transcription regulator protein.
  
     0.667
RSc0867
Putative hns-like transcription regulator protein.
  
     0.644
RSp0029
Putative hns-like transcription regulator protein.
  
     0.632
RSc2234
Probable transmembrane protein.
  
     0.630
RSc1523
Probable transmembrane protein.
  
     0.627
RSc1397
Probable transmembrane protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.624
RSc2080
Probable transmembrane protein.
  
     0.612
RSc3299
Probable transmembrane protein.
  
     0.610
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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