STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gspCPutative general secretion pathway related transmembrane protein. (228 aa)    
Predicted Functional Partners:
gspD
Probable general secretory pathway d transmembrane protein.
  
 
 0.860
gspN
Probable general secretory pathway n transmembrane protein.
     
 0.854
gspK
Probable general secretory pathway k transmembrane protein.
  
  
 0.847
RSp0474
Putative general secretion pathway gspd-related protein; Belongs to the bacterial secretin family.
  
 
 0.817
hrcC
Hrp conserved hrcc transmembrane protein; Component of the type III secretion system (T3SS), also called injectisome, which is used to inject bacterial effector proteins into eukaryotic host cells. Forms a ring-shaped multimeric structure with an apparent central pore in the outer membrane.
  
 
 0.817
gspJ
Probable general secretory pathway j transmembrane protein.
  
  
 0.796
gspG
Putative general secretion pathway g transmembrane protein.
  
  
 0.792
gspI
Probable general secretory pathwayItransmembrane protein.
  
  
 0.789
gspM
Probable general secretory pathway m transmembrane protein.
     
 0.782
gspF
Probable general secretory pathway f transmembrane protein.
  
  
 0.716
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.