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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gspHProbable general secretory pathway h transmembrane protein. (165 aa)    
Predicted Functional Partners:
gspK
Probable general secretory pathway k transmembrane protein.
 
 
 0.985
gspJ
Probable general secretory pathway j transmembrane protein.
 
 
 0.980
gspG
Putative general secretion pathway g transmembrane protein.
 
  
 0.974
gspI
Probable general secretory pathwayItransmembrane protein.
 
  
 0.973
gspM
Probable general secretory pathway m transmembrane protein.
 
  
 0.910
gspD
Probable general secretory pathway d transmembrane protein.
 
  
 0.851
gspF
Probable general secretory pathway f transmembrane protein.
 
  
 0.793
gspE
Probable general secretion pathway protein e; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.758
ffh
Probable gtp-binding signal recognition particle srp54, g-domain protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY [...]
      
 0.742
gspL
Probable general secretory pathway l transmembrane protein.
  
  
 0.713
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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