STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eutBPutative ethanolamine ammonia-lyase heavy chain protein. (464 aa)    
Predicted Functional Partners:
eutC
Putative ethanolamine ammonia-lyase light chain (ethanolamineammonia-lyase small subunit) protein; Belongs to the EutC family.
 0.999
glpQ
Putative glycerophosphoryl diester phosphodiesterase, periplasmic precursor protein.
     
  0.900
ugpQ
Probable glycerophosphoryl diester phosphodiesterase protein.
     
  0.900
ttcA
Putative cog0037, predicted atpase of the pp-loop superfamily protein; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.
      
 0.793
sbcB
Putative exodeoxyribonucleaseIprotein.
       0.693
tpiA
Probable triosephosphate isomerase (tim) (triose-phosphateisomerase) protein; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
      
 0.651
adhA
Putative propanol-preferring alcohol dehydrogenase oxidoreductase protein.
    
  0.623
exaC
Putative nad+ dependent acetaldehyde dehydrogenase oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
  
  
 0.599
dmpF
Probable acetaldehyde dehydrogenase oxidoreductase protein; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
     
  0.499
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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