STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc3137Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (985 aa)    
Predicted Functional Partners:
ragG
Probable polysaccharide synthase transmembrane protein.
 
   
 0.817
ragC
Probable outer membrane lipoprotein.
 
   
 0.813
ragF
Probable glycosyl-transfrase protein.
 
   
 0.792
RSc2734
Probable response regulator transcription regulator protein.
  
     0.615
addB
Probable homologous recombinational repair protein.
  
     0.566
RSc0317
Probable transmembrane protein.
  
     0.556
phcB
Regulatory protein.
  
     0.548
RSc2655
Probable transmembrane protein.
  
     0.530
phcS
Transmembrane sensor histidine kinase transcription regulator protein.
  
     0.526
repA
Probable repa replicase protein.
  
     0.518
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.