STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc3160Probable two component sensor histidine kinase transcription regulator protein. (626 aa)    
Predicted Functional Partners:
RSc3161
Probable two component response regulator transcription regulator protein.
 
 
 0.929
vsrD
Response regulator transcription regulator protein.
 
 
 0.821
RSp0381
Probable transcription regulator protein.
 
 
 0.816
narL
Probable nitrate/nitrite response regulator transcription regulator protein.
 
 
 0.804
rcsB
Probable capsular synthesis response regulator transcription regulator protein.
 
 
 0.803
RSc3078
Probable response regulator transcription regulator protein.
 
 
 0.802
RSc0192
Probable response regulator transcription regulator protein.
 
 
 0.797
RSc2312
Probable two-component response regulator transcription regulator protein.
 
 
 0.794
epsR
Negative regulator of exopolysaccharide production transcription regulator protein.
 
 
 0.776
RSc3388
Probable two-component response regulator transcription regulator protein.
 
 
 0.774
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.