STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RSc3205Probable transmembrane drug efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1040 aa)    
Predicted Functional Partners:
RSc3206
Probable transport lipoprotein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.963
RSc3207
Putative transcription regulator protein.
 
     0.889
RSc1653
Putative transport/efflux transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.842
RSc3208
Putative drug efflux lipoprotein.
   0.683
RSc3209
Putative short-chain dehydrogenase/reductase sdr; oxidoreductase protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.653
RSp1457
Putative cation-efflux system signal peptide protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.524
RSp1041
Probable cation transporter transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.477
RSp1197
Putative membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.464
RSp0529
Putative cation efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.460
RSp1112
Probable transmembrane multidrug efflux system transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.452
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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