STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc3206Probable transport lipoprotein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (371 aa)    
Predicted Functional Partners:
RSc3205
Probable transmembrane drug efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.963
RSc3207
Putative transcription regulator protein.
 
     0.893
RSc3208
Putative drug efflux lipoprotein.
 
 
 0.844
RSc1654
Probable transmembrane drug efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.829
RSc3209
Putative short-chain dehydrogenase/reductase sdr; oxidoreductase protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.746
RSc0695
Probable porin (omp) abc transporter protein.
  
 0.671
RSc1653
Putative transport/efflux transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 
0.634
RSp1462
Putative outer membrane efflux protein.
  
  0.632
RSp1197
Putative membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 
0.572
RSp1457
Putative cation-efflux system signal peptide protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 
0.569
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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