STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc3206Probable transport lipoprotein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (371 aa)    
Predicted Functional Partners:
RSc3205
Probable transmembrane drug efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.962
RSc3207
Putative transcription regulator protein.
 
     0.893
RSc3208
Putative drug efflux lipoprotein.
 
   0.841
RSc1654
Probable transmembrane drug efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.825
RSc3209
Putative short-chain dehydrogenase/reductase sdr; oxidoreductase protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.747
RSp1465
Probable abc-type transport system, permease component abc transporter protein.
  
 
 0.507
RSc3204
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.417
RSp1040
Putative cation efflux system transmembrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.411
RSp1113
Probable transmembrane multidrug-efflux system lipoprotein transmembrane.
 
   0.409
RSp0818
Probable drug efflux transmembrane protein.
 
   0.403
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.