STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc3228Putative bacteriophage-related protein. (154 aa)    
Predicted Functional Partners:
RSc3226
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.950
RSc3231
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.895
ruvA
Probable holliday junction dna helicase ruva protein; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.
  
 
 0.888
RSc3234
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.885
RSc3235
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.885
RSc3237
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.881
RSc3238
Hypothetical protein; Elements of external origin.
 
     0.880
RSc3229
Putative bacteriophage-related protein.
 
  
 0.878
RSc0835
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.788
RSc0836
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.788
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.