STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc3232Putative bacteriophage-related protein. (182 aa)    
Predicted Functional Partners:
RSc3229
Putative bacteriophage-related protein.
       0.810
RSc3236
Probable phage integrase protein.
 
    
0.806
RSc3230
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.782
RSc3231
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.782
RSc3234
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.780
RSc3235
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.780
RSc3237
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.780
RSc3233
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.778
RSc3238
Hypothetical protein; Elements of external origin.
  
    0.772
RSc3227
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.492
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.