STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc3235Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (301 aa)    
Predicted Functional Partners:
RSc3234
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
     0.956
RSc3231
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.950
RSc3237
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.949
RSc3238
Hypothetical protein; Elements of external origin.
 
     0.946
RSc3229
Putative bacteriophage-related protein.
 
     0.930
RSc3228
Putative bacteriophage-related protein.
 
     0.885
RSc3226
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.882
RSp0216
Putative type III effector protein (serine/threonine-protein kinase).
    
 0.840
apaH
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
   
 0.819
RSc0836
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
     0.817
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.