STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc3254Putative thioredoxin fold harboring signal peptide protein. (172 aa)    
Predicted Functional Partners:
RSc3256
Putative cytochrome c-related protein.
 
 
 0.830
RSc3255
Putative cytochrome c transmembrane protein.
 
 
 
 0.829
dsbD
Thiol:disulfide interchange protein DsbD; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps (By similarity); Belongs to the thioredoxin family. DsbD subfamily.
  
 
 0.802
RSc3253
Probable sulfur oxidation signal peptide protein; Belongs to the 5'-nucleotidase family.
   
 
 0.787
RSc2287
Putative thiol-disulfide isomerase and thioredoxins protein.
 
   
 0.786
RSc3257
Hypothetical signal peptide protein.
 
     0.784
RSc3258
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.755
RSc3259
Hypothetical transmembrane protein.
 
     0.720
RSc3260
Probable cytochrome c551/c552 transmembrane protein.
       0.663
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.642
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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