STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc3258Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (103 aa)    
Predicted Functional Partners:
RSc3259
Hypothetical transmembrane protein.
 
 0.999
RSc3253
Probable sulfur oxidation signal peptide protein; Belongs to the 5'-nucleotidase family.
 
  
 0.996
RSc3255
Putative cytochrome c transmembrane protein.
 
  
 0.995
RSc3256
Putative cytochrome c-related protein.
 
  
 0.994
sorAa
Probable sulfite:cytochrome c oxidoreductase (subunit a) oxidoreductase protein.
 
  
 0.952
RSc3257
Hypothetical signal peptide protein.
 
    0.951
sseA
Probable thiosulfate sulfurtransferase protein.
     
 0.910
cysD
Putative sulfate adenylyltransferase subunit 2 protein.
     
 0.910
cysN
Probable sulfate adenylyltransferase subunit 1 protein; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
 0.903
soxF
Probable sulfide dehydrogenase flavocytochrome c oxidoreductase protein.
 
   
 0.876
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.