STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc3260Probable cytochrome c551/c552 transmembrane protein. (141 aa)    
Predicted Functional Partners:
RSc0629
Putative oxidoreductase cytochrome c552 precursor signal peptide protein.
  
  
 
0.913
RSc3255
Putative cytochrome c transmembrane protein.
 
  
 0.836
RSc3259
Hypothetical transmembrane protein.
 
     0.818
RSc3257
Hypothetical signal peptide protein.
 
     0.779
RSc3258
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.769
RSc3253
Probable sulfur oxidation signal peptide protein; Belongs to the 5'-nucleotidase family.
 
   
 0.736
RSc3256
Putative cytochrome c-related protein.
 
   
 0.727
nosR
Probable transmembrane regulatory nosr transcription regulator protein.
  
  
 0.664
RSc3254
Putative thioredoxin fold harboring signal peptide protein.
       0.663
RSc2224
Putative bacterial ring hydroxylating dioxygenase, alpha subunit; EC_number 1.14.1.-.
  
     0.642
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.