STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RSc3268Putative beta-lactamase-like protein. (224 aa)    
Predicted Functional Partners:
gloA
Probable lactoylglutathione lyase (methylglyoxalase) protein.
  
 0.931
gloB
Putative hydroxyacylglutathione hydrolase protein; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
  
  
0.909
ldhA
Putative d-lactate dehydrogenase (d-ldh) oxidoreductase protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
  0.904
dld
Putative d-lactate dehydrogenase (cytochrome) oxidoreductase protein.
     
  0.900
RSc3269
Hypothetical transmembrane protein.
     
 0.797
RSp0641
Probable non ribosomal peptide synthetase protein.
   
 
 0.526
rlpA
Probable lipoprotein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
       0.505
RSc3270
Hypothetical transmembrane protein.
       0.413
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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