STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc3271Putative arsenate reductase oxidoreductase protein. (134 aa)    
Predicted Functional Partners:
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.680
arsR
Putative arsenical resistance operon repressor transcription regulator protein.
 
   
 0.508
RSc3272
Putative type III effector protein.
       0.461
RSp1664
Putative ribonuclease rnase bn (rbn) transmembrane protein.
  
  
 0.430
RSc0184
Probable osmosensitive k+ channel his kinase sensor;universal stress protein (usp).
   
  
 0.414
RSc1359
Putative universal stress protein uspa and related nucleotide-binding proteins.
   
  
 0.414
RSp1159
Probable universal stress protein related nucleotide-binding protein.
   
  
 0.414
RSp1561
Probable universal stress protein (usp).
   
  
 0.414
dsbA1
Probable thiol:disulfide interchange signal peptide protein.
    
 
 0.408
RSp0909
Putative predicted dithiol-disulfide isomerase involved in polyketide biosynthesis protein.
    
 
 0.408
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.