STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
relEPutative cytotoxic translational repressor of toxin-antitoxin stability system protein. (86 aa)    
Predicted Functional Partners:
RSc0125
Putative lambda repressor-like, dna-binding; transcription regulator protein.
   
 
 0.836
tadB2
Probable pilus assembly tadb transmembrane protein.
      
 0.827
RSc3278
Probable transcription regulator protein.
     
 0.795
parE
Probable dna topoisomerase iv (subunit b) protein; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.
      
 0.768
rfbB
Probable dtdp-glucose 4,6-dehydratase protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
      
 0.635
hipA
Putative hipa transcription regulator protein.
      
 0.577
RSc3280
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
       0.497
lexA
Probable lexa repressor. transcription regulator protein; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.
     
 0.483
rdgC
Probable recombination associated protein rdgc; May be involved in recombination.; Belongs to the RdgC family.
      
 0.415
repA
Probable repa replicase protein.
      
 0.410
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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