STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc3313Putative coa-binding protein. (153 aa)    
Predicted Functional Partners:
metY
Probable o-acetylhomoserine (thiol)-lyase (methionine/homocysteine synthase) protein.
      0.905
RSp1583
Probable o-acetylhomoserine sulfhydrylase transmembrane protein.
      0.820
RSc3314
Putative signal peptide protein.
       0.741
msrB
Probable peptide methionine sulfoxide reductase related protein; Belongs to the MsrB Met sulfoxide reductase family.
 
      0.710
RSc3312
Probable esterase / lipase protein.
       0.603
RSc0048
Putative transcription regulator protein; Belongs to the Fur family.
  
    0.506
fur1
Probable ferric uptake transcriptional repressor transcription regulator protein; Belongs to the Fur family.
  
    0.506
fur2
Probable ferric uptake transcriptional (fur)-related transcription regulator protein; Belongs to the Fur family.
  
    0.506
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.