STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc3315Putative transmembrane protein. (787 aa)    
Predicted Functional Partners:
ftsZ
Probable cell division ftsz transmembrane protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.928
RSp1650
Probable cog5662, predicted transmembrane transcriptional regulator (anti-sigma factor) transcription regulator protein.
  
     0.599
RSp0116
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.533
nfrB
Probable inner membrane transmembrane protein.
 
   
 0.518
RSc0299
Putative prolin-rich signal peptide protein.
  
     0.512
RSc0238
Hypothetical of unknown function duf1275; transmembrane protein.
  
     0.510
ftsA
Probable cell division protein ftsa; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
   
 
 0.507
RSc3390
Probable porin signal peptide protein.
  
     0.501
RSc0450
Probable atp-sensitive inward rectifier potassium channel related transmembrane protein.
 
     0.500
adc
Probable acetoacetate decarboxylase (adc) (aad) protein; Catalyzes the conversion of acetoacetate to acetone and carbon dioxide; Belongs to the ADC family.
  
     0.493
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.