STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copZProbable copper ion-binding protein. (66 aa)    
Predicted Functional Partners:
sodC
Probable superoxide dismutase cu-zn precursor protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
 0.990
RSc3348
Probable cation-transporting atpase transmembrane protein.
 
 
 0.931
RSc1274
Probable cation-transporting atpase lipoprotein transmembrane.
  
 
 0.835
RSp0319
Probable metal-transporting p-type atpase transmembrane protein.
  
 
 0.835
RSc3347
Probable transcription regulator protein.
 
  
 0.798
RSp0320
Probable transcription regulator protein.
 
  
 0.612
RSp0553
Hypothetical protein of unknown function duf156.
  
  
 0.583
arsR
Putative arsenical resistance operon repressor transcription regulator protein.
     
 0.582
rplN
Probable 50s ribosomal subunit protein l14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.539
adhA
Putative propanol-preferring alcohol dehydrogenase oxidoreductase protein.
     
 0.535
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.