Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aatA1 | aatA2 | RSp1232 | RSp0943 | Probable aspartate aminotransferase a protein. | Probable aspartate aminotransferase a protein. | 0.904 |
aatA1 | aspC | RSp1232 | RSc1096 | Probable aspartate aminotransferase a protein. | Probable aspartate aminotransferase protein. | 0.905 |
aatA1 | hisC1 | RSp1232 | RSc2951 | Probable aspartate aminotransferase a protein. | Probable histidinol-phosphate aminotransferase 1 (imidazoleacetol-phosphate transaminase 1) protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.828 |
aatA1 | hisC2 | RSp1232 | RSc0905 | Probable aspartate aminotransferase a protein. | Probable histidinol-phosphate aminotransferase 2 (imidazoleacetol-phosphate transaminase 2) protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.824 |
aatA1 | pheA | RSp1232 | RSc0904 | Probable aspartate aminotransferase a protein. | Probable bifunctional protein: chorismate mutase and prephenate dehydratase. | 0.989 |
aatA1 | phhA | RSp1232 | RSc3355 | Probable aspartate aminotransferase a protein. | Probable phenylalanine-4-hydroxylase (pah) (phe-4-monooxygenase). oxidoreductase protein. | 0.908 |
aatA1 | tyrB | RSp1232 | RSc1010 | Probable aspartate aminotransferase a protein. | Probable aromatic-amino-acid aminotransferase protein. | 0.835 |
aatA2 | aatA1 | RSp0943 | RSp1232 | Probable aspartate aminotransferase a protein. | Probable aspartate aminotransferase a protein. | 0.904 |
aatA2 | aspC | RSp0943 | RSc1096 | Probable aspartate aminotransferase a protein. | Probable aspartate aminotransferase protein. | 0.906 |
aatA2 | hisC1 | RSp0943 | RSc2951 | Probable aspartate aminotransferase a protein. | Probable histidinol-phosphate aminotransferase 1 (imidazoleacetol-phosphate transaminase 1) protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.848 |
aatA2 | hisC2 | RSp0943 | RSc0905 | Probable aspartate aminotransferase a protein. | Probable histidinol-phosphate aminotransferase 2 (imidazoleacetol-phosphate transaminase 2) protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.827 |
aatA2 | pheA | RSp0943 | RSc0904 | Probable aspartate aminotransferase a protein. | Probable bifunctional protein: chorismate mutase and prephenate dehydratase. | 0.986 |
aatA2 | phhA | RSp0943 | RSc3355 | Probable aspartate aminotransferase a protein. | Probable phenylalanine-4-hydroxylase (pah) (phe-4-monooxygenase). oxidoreductase protein. | 0.908 |
aatA2 | tyrB | RSp0943 | RSc1010 | Probable aspartate aminotransferase a protein. | Probable aromatic-amino-acid aminotransferase protein. | 0.835 |
aspC | aatA1 | RSc1096 | RSp1232 | Probable aspartate aminotransferase protein. | Probable aspartate aminotransferase a protein. | 0.905 |
aspC | aatA2 | RSc1096 | RSp0943 | Probable aspartate aminotransferase protein. | Probable aspartate aminotransferase a protein. | 0.906 |
aspC | hisC1 | RSc1096 | RSc2951 | Probable aspartate aminotransferase protein. | Probable histidinol-phosphate aminotransferase 1 (imidazoleacetol-phosphate transaminase 1) protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.828 |
aspC | hisC2 | RSc1096 | RSc0905 | Probable aspartate aminotransferase protein. | Probable histidinol-phosphate aminotransferase 2 (imidazoleacetol-phosphate transaminase 2) protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.825 |
aspC | pheA | RSc1096 | RSc0904 | Probable aspartate aminotransferase protein. | Probable bifunctional protein: chorismate mutase and prephenate dehydratase. | 0.988 |
aspC | phhA | RSc1096 | RSc3355 | Probable aspartate aminotransferase protein. | Probable phenylalanine-4-hydroxylase (pah) (phe-4-monooxygenase). oxidoreductase protein. | 0.908 |
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