STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
acyP2Putative cog1254, acylphosphatase protein. (95 aa)    
Predicted Functional Partners:
acyP1
Putative acylphosphatase; protein.
  
  
 
0.912
betB
Putative betaine aldehyde dehydrogenase (badh) oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
     
 0.902
RSc2350
Probable aldehyde dehydrogenase oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
     
 0.902
exaC
Putative nad+ dependent acetaldehyde dehydrogenase oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
     
 0.902
RSp0229
Putative benzaldehyde dehydrogenase oxidoreductase protein.
     
 0.902
RSc0471
Putative coenzyme a transferase; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family.
     
  0.900
RSc1823
Hypothetical protein; Small molecule metabolism.
     
  0.900
acsA
Probable acetyl-coenzyme a synthetase (acetate--coa ligase) (acyl-activating enzyme) protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.900
RSp0651
Probable acetyl-coenzyme a synthetase (acetate--coa ligase) protein.
     
 0.900
RSp1265
Probable acetyl-coenzyme a synthetase (acetate--coa ligase) protein.
     
 0.900
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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