STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc3372Probable composite atp-binding transmembrane abc transporter protein. (449 aa)    
Predicted Functional Partners:
RSc3371
Putative transmembrane abc transporter protein.
 
   
 0.966
RSc1200
Probable cog0600, abc-type nitrate/sulfonate/bicarbonate transport system, permease component abc transporter protein.
 
 0.851
ssuC
Putative aliphatic sulfonates transmembrane abc transporter protein.
 
 0.834
nasE
Putative nitrate transmembrane abc transporter protein.
 
 
 0.813
RSp1508
Probable transmembranee abc transporter protein.
 
 
 0.795
nasF
Putative nitrate transporter protein.
 
 
 0.779
ssuA2
Putative alkanesulfonates binding protein precursor.
 
 
 0.703
nosF
Probable abc-type copper transport system, atpase component abc transporter protein.
 
   
0.698
RSc1198
Putative abc-type nitrate/sulfonate/bicarbonate transport system, periplasmic component abc transporter protein.
 
 
 0.691
ssuA1
Putative alkanesulfonates binding precursor signal peptide protein.
 
 
 0.672
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.