STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc3372Probable composite atp-binding transmembrane abc transporter protein. (449 aa)    
Predicted Functional Partners:
RSc3371
Putative transmembrane abc transporter protein.
 
   
 0.959
RSc1200
Probable cog0600, abc-type nitrate/sulfonate/bicarbonate transport system, permease component abc transporter protein.
  
 0.800
ssuC
Putative aliphatic sulfonates transmembrane abc transporter protein.
  
 0.776
nasE
Putative nitrate transmembrane abc transporter protein.
  
 0.749
RSp1508
Probable transmembranee abc transporter protein.
  
 0.723
nasF
Putative nitrate transporter protein.
 
  
 0.720
nosF
Probable abc-type copper transport system, atpase component abc transporter protein.
 
   
0.700
ssuA2
Putative alkanesulfonates binding protein precursor.
  
 0.623
RSc1198
Putative abc-type nitrate/sulfonate/bicarbonate transport system, periplasmic component abc transporter protein.
 
  
 0.609
ssuA1
Putative alkanesulfonates binding precursor signal peptide protein.
  
 0.585
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.