STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc3387Probable two-component response regulator with eal domain transcription regulator protein. (403 aa)    
Predicted Functional Partners:
RSp1203
Probable signal transduction protein ggdef domain.
 
 0.994
RSp0398
Putative signal transduction ggdef domain transmembrane protein.
 
 0.957
RSp0012
Probable signal transduction ggdef domain transmembrane protein.
 
 
 0.952
RSp0400
Putative signal transduction ggdef domain transmembrane protein.
 
 0.951
RSc0375
Probable signal transduction ggdef domain transmembrane protein.
 
 
 0.946
RSp0253
Putative signal transduction transmembrane protein.
 
  
 0.922
RSc3079
Probable composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein.
 
 0.919
RSp0254
Probable signal transduction eal-ggdef domains transmembrane protein.
 
 
0.917
RSp0255
Probable methyl-accepting chemotaxis transducer transmembrane protein.
  
 
 0.911
aer
Probable aerotaxis sensor receptor (chemotaxis transducer) transmembrane protein.
  
 
 0.911
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.